Functions for scraping git commits from repositories associated with a PhD (or anything else) and plotting them.
My PhD completion seminar
Presentation at the Institute of Computational Biology where I described my PhD projects.
Selected talk at the Genome Informatics 2018 conference where I described how clustering trees can be used with scRNA-seq data.
Presentation at the userR! 2018 conference introducing the clustree package and demonstrating how it makes use of the ggraph package.
Selected talk at the Oz Single Cells 2018 conference where I presented clustering trees and the clustree package.
Clustering techniques are widely used in the analysis of large datasets to group together samples with similar properties. For example, clustering is often used in the field of single-cell RNA-sequencing in order to identify different cell types …
CRAN R package for creating clustering trees, a visualisation for looking at clustering across resolutions.
Presentation at the Berkeley Statistics and Genomics Seminar describing my PhD projects.
Analysis of Twitter activity at the Joining the Dots visualisation symposium.