Using clustering trees to visualise scRNA-seq data

Selected talk at the Genome Informatics 2018 conference where I described how clustering trees can be used with scRNA-seq data.

Clustering trees for visualising scRNA-seq data

Selected talk at the Oz Single Cells 2018 conference where I presented clustering trees and the clustree package.

Clustering trees: a visualization for evaluating clusterings at multiple resolutions

Clustering techniques are widely used in the analysis of large datasets to group together samples with similar properties. For example, clustering is often used in the field of single-cell RNA-sequencing in order to identify different cell types …


CRAN R package for creating clustering trees, a visualisation for looking at clustering across resolutions.

Building a clustering tree

Joining the Dots Visualisation Symposium talk describing the clustering tree visualisation algorithm.