clustree

clustering
visualisation
software
R
CRAN R package for creating clustering trees, a visualisation for looking at clustering across resolutions
Authors

Luke Zappia

Alicia Oshlack

Date

March 27, 2018

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Deciding what resolution to use can be a difficult question when approaching a clustering analysis. One way to approach this problem is to look at how samples move as the number of clusters increases. The clustree package is available from CRAN (https://cran.r-project.org/package=clustree) and allows you to produce clustering trees, a visualisation for interrogating clusterings as resolution increases.